How to add a second x-axis in matplotlib

PythonMatplotlib

Python Problem Overview


I have a very simple question. I need to have a second x-axis on my plot and I want that this axis has a certain number of tics that correspond to certain position of the first axis.

Let's try with an example. Here I am plotting the dark matter mass as a function of the expansion factor, defined as 1/(1+z), that ranges from 0 to 1.

semilogy(1/(1+z),mass_acc_massive,'-',label='DM')
xlim(0,1)
ylim(1e8,5e12)

I would like to have another x-axis, on the top of my plot, showing the corresponding z for some values of the expansion factor. Is that possible? If yes, how can I have xtics ax

Python Solutions


Solution 1 - Python

I'm taking a cue from the comments in @Dhara's answer, it sounds like you want to set a list of new_tick_locations by a function from the old x-axis to the new x-axis. The tick_function below takes in a numpy array of points, maps them to a new value and formats them:

import numpy as np
import matplotlib.pyplot as plt

fig = plt.figure()
ax1 = fig.add_subplot(111)
ax2 = ax1.twiny()

X = np.linspace(0,1,1000)
Y = np.cos(X*20)

ax1.plot(X,Y)
ax1.set_xlabel(r"Original x-axis: $X$")

new_tick_locations = np.array([.2, .5, .9])

def tick_function(X):
    V = 1/(1+X)
    return ["%.3f" % z for z in V]

ax2.set_xlim(ax1.get_xlim())
ax2.set_xticks(new_tick_locations)
ax2.set_xticklabels(tick_function(new_tick_locations))
ax2.set_xlabel(r"Modified x-axis: $1/(1+X)$")
plt.show()

enter image description here

Solution 2 - Python

You can use twiny to create 2 x-axis scales. For Example:

import numpy as np
import matplotlib.pyplot as plt

fig = plt.figure()
ax1 = fig.add_subplot(111)
ax2 = ax1.twiny()

a = np.cos(2*np.pi*np.linspace(0, 1, 60.))

ax1.plot(range(60), a)
ax2.plot(range(100), np.ones(100)) # Create a dummy plot
ax2.cla()
plt.show()

Ref: http://matplotlib.sourceforge.net/faq/howto_faq.html#multiple-y-axis-scales

Output: enter image description here

Solution 3 - Python

If You want your upper axis to be a function of the lower axis tick-values you can do as below. Please note: sometimes get_xticks() will have a ticks outside of the visible range, which you have to allow for when converting.

import matplotlib.pyplot as plt

fig, ax1 = plt.subplots()

ax1 = fig.add_subplot(111)

ax1.plot(range(5), range(5))

ax1.grid(True)

ax2 = ax1.twiny()
ax2.set_xticks( ax1.get_xticks() )
ax2.set_xbound(ax1.get_xbound())
ax2.set_xticklabels([x * 2 for x in ax1.get_xticks()])

title = ax1.set_title("Upper x-axis ticks are lower x-axis ticks doubled!")
title.set_y(1.1)
fig.subplots_adjust(top=0.85)

fig.savefig("1.png")

Gives:

enter image description here

Solution 4 - Python

From matplotlib 3.1 onwards you may use ax.secondary_xaxis

import numpy as np
import matplotlib.pyplot as plt

x = np.linspace(1,13, num=301)
y = (np.sin(x)+1.01)*3000

# Define function and its inverse
f = lambda x: 1/(1+x)
g = lambda x: 1/x-1

fig, ax = plt.subplots()
ax.semilogy(x, y, label='DM')

ax2 = ax.secondary_xaxis("top", functions=(f,g))

ax2.set_xlabel("1/(x+1)")
ax.set_xlabel("x")
plt.show()

Solution 5 - Python

Answering your question in Dhara's answer comments: "I would like on the second x-axis these tics: (7,8,99) corresponding to the x-axis position 10, 30, 40. Is that possible in some way?" Yes, it is.

import numpy as np
import matplotlib.pyplot as plt

fig = plt.figure()
ax1 = fig.add_subplot(111)

a = np.cos(2*np.pi*np.linspace(0, 1, 60.))
ax1.plot(range(60), a)

ax1.set_xlim(0, 60)
ax1.set_xlabel("x")
ax1.set_ylabel("y")

ax2 = ax1.twiny()
ax2.set_xlabel("x-transformed")
ax2.set_xlim(0, 60)
ax2.set_xticks([10, 30, 40])
ax2.set_xticklabels(['7','8','99'])

plt.show()

You'll get: enter image description here

Solution 6 - Python

I'm forced to post this as an answer instead of a comment due to low reputation. I had a similar problem to Matteo. The difference being that I had no map from my first x-axis to my second x-axis, only the x-values themselves. So I wanted to set the data on my second x-axis directly, not the ticks, however, there is no axes.set_xdata. I was able to use Dhara's answer to do this with a modification:

ax2.lines = []

instead of using:

ax2.cla()

When in use also cleared my plot from ax1.

Attributions

All content for this solution is sourced from the original question on Stackoverflow.

The content on this page is licensed under the Attribution-ShareAlike 4.0 International (CC BY-SA 4.0) license.

Content TypeOriginal AuthorOriginal Content on Stackoverflow
QuestionBrianView Question on Stackoverflow
Solution 1 - PythonHookedView Answer on Stackoverflow
Solution 2 - PythonDharaView Answer on Stackoverflow
Solution 3 - PythonAdobeView Answer on Stackoverflow
Solution 4 - PythonDelengesView Answer on Stackoverflow
Solution 5 - PythoncarlaView Answer on Stackoverflow
Solution 6 - Pythonuser2561747View Answer on Stackoverflow